Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTICNMSGEGLMACKPAVSPPNPAPPSAACCSALSHADM----------HCLCSYRNSKLLPSM-GIDPNLALQLPKKCKFPNAAHC
1AFH Chain:A ((3-80))
--SCGQVASAIAPCISYARGQGS-GPSAGCCSGVRSLNNAARTTADRRAACNC-LKNA--AAGVSGLNAGNAASIPSKCGVSIP---
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26826 for 485 contacts (-55.3/contact) +
2D Compatibility (PS) -7036 + (NN) -7582 + (LL) 772
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -43472.0 ( -89.63 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: