Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTSCGPVVTSLYPCVSYIMNGGNTVPAAQCCNGIRNLNTMAQTTNDRRAVCTCIKNAVSQSGFSYTNLNLNLAAGLPRKCGVNIPYQISPNTDCNSVH
2ALG Chain:A ((1-92))
-MITCGQVSSSLAPCIPYVRGGG--AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSAS----VPGVNPNNAAALPGKCGVSIPYKISASTNCATVK
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63866 for 636 contacts (-100.4/contact) +
2D Compatibility (PS) -9354 + (NN) -1434 + (LL) 20
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: -84084.0 ( -132.21 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: