Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------APSCPAVAQTLTPCLPHVSNPGPSPPQPC---CNRVKTLNSQAK-----------TTQDRHHVCGCLKSLMAGI-----PGLNLPAFASVAKDCGVDIGYIISPNTDCSK-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRN--AAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY-LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21772 for 409 contacts (-53.2/contact) +
2D Compatibility (PS) -8649 + (NN) -5894 + (LL) 28
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -39537.0 ( -96.67 by residue)
QMean score : 0.361
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