Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VITCPDADITLKSCLPYVAHPTQWPPLECCTAVLGLTARAVTREDRQAVCKCLLGLMNGIPGLDLTAFAAVPILCAANIGYIIRPNMDCNSVP
1BWO Chain:A ((1-90))
-IDCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV-
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87856 for 622 contacts (-141.2/contact) +
2D Compatibility (PS) -9538 + (NN) -6248 + (LL) 104
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -109938.0 ( -176.75 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: