Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VITCRDAAITLMGCLPYVAHPTPSPPQNCCAAVLDVTGQAITREDRQAVCSCLKGLMNGIPGLDLTALASLPKVCGANIGYEISPDMDCSKIN
2ALG Chain:A ((1-92))
MITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATVK
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70587 for 636 contacts (-111.0/contact) +
2D Compatibility (PS) -9817 + (NN) -7042 + (LL) -140
1D Compatibility (HY) -6000 + (ID) 1750
Total energy: -95336.0 ( -149.90 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: