Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFTYTRTALASLLTLCSFSGFAADSFNEGMKGVKKQENIKSITTSEKMEVMKTSNKRLKEKMDRICNADPRKKAEELKKKEELKLAAEKKKEELAEKKRKETKLASEKKAKPLDAKNSNVESSKTRGTETQKARDVKKNFKKDVKIVGQNAEKKGEASPVILVGGVDVIDTNQGTSGLKITFGGVVDAQGYGKAGPSGEDYKHYNVMSGKSTGYYEDISDKVKGANPIFPSGIGNIGDYSEDIDMIADAILHLRAEDKNEDKGLLYGADVQFQVPVTEGKGASQGVRATRGRSAHVFLSSRYGDLKLGYQFGPEALMRLDATRIATIDGAADSDWFRKVNLEGSAASFPFYVTPRLYTESFSSESEKLSFRMAGKYHKNVMTTLPFRFAYYSPNYMGARFGVSYSPRYDSNLFVIKDGDNIKHVGPDYEHIVSAGASYEYDFSERKVKVKVAAVGEYGQAKEPDSTKYAYKEYVEYNDLMGVNLGISADCNINEDQGVKFAASFAYLGKSGQPKGIEKLVGNVYQKIDGKGVTDDDKRVKELEDQFKGDDKNTMYWTAGAGYQHENFYISLTY------------FGSKMSDGDKL--HDVAFGIQYDLSPASSKGK------------FVPYASLHYFKTDEKQGGGYKITKKDSSGIAPSNQGVLFLTGMKFSF |
| 1PHO Chain:A ((189-340)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22498 for 639 contacts (35.2/contact) +
2D Compatibility (PS) -12278 + (NN) 2380 + (LL) 28768
1D Compatibility (HY) -4400 + (ID) 1600
Total energy: 35368.0 ( 55.35 by residue)
QMean score : 0.001
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