Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVWYELTLFGVLTHIISNVFFPSESDYLSTIKFLGSFAVGFGFRPLGAFIFGYIGDKYGRRKVLLTSVILVSISSTAIAVIPDFKEIGILSPILLLLCRIVQGTAAGGETSINSAFLIEHSSDKKDLGFLGSMKAFSGALGSITCFLMIAIVKKFTGENYEIWGWRLLFYFCSIMGVIGFL-TRYIMEESLAYKTHDQNKSLSNSPFLELIRSYKKAFMIAIGLGIAQNAIVYSAIMFYNISVKELILSGIDIKNVVR---IT-VEIT-FGTSAVLFAILSDKVGRKNVMVLILIALACAGLPAFSLLSYDNHYIVTLTFLLISIPIGASFGIYNSLVCELLPTKVRCTGFSLAHNISAGIFGGISPSICMWLIEKTETELAAGFYLTMCALISLIYVLQIKTEDKKVDW |
| 3WDO Chain:A ((47-364)) | ---------------------------LIGIA-----IGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSI--------WGIILGRALQGSGA--IAAAVMALLSDLT-REQNRTKAMAFIGVSFGITFAIAMVLGPIIT-------HKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRES-GMVKGSFSKVLA-EPRLLKLNFGI-MCLHMLLMSTFV-ALPGQLAD--AGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQ--VFVFCVGLIVVAEIV-LW-NAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTS-QFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -245802 for 2457 contacts (-100.0/contact) +
2D Compatibility (PS) -31465 + (NN) -425 + (LL) 3428
1D Compatibility (HY) -17600 + (ID) 2050
Total energy: -293914.0 ( -119.62 by residue)
QMean score : 0.178
|
|
|