Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKILILLLIILPIKLLAVEIEIIADVNGEPISNLDIEKRINLTHSLFG---TQSIDKNELKLQILKQLIDEIIIINEAQRLNIKLSDEELSNAVVLFLTQSFKLKDNEVDQYAKEHNIGLNILKRQIECQLLWDKIIEVRIVPFINISDKEVNNAKGQIEKPDYLITFQEFIIPNQK------DADVYGIAEDLVEKLRNNNN---DFIPEAPIKMRK-----VTVNLNQLKGNLKSILEGLKTGDIAGPVSSSEDYSIVKVIDKVQLDHAMLESTLKLKQIVVKDSES--------LLDNLKEQKVNC-LNFDELADNFNLP-----NAKEF-EIKMRDLNPDLQALFSKTSVNEIIES-RENSTARLMMLCDIKNNVVDAEATKQQIYQQKIMTQSNLLLDNLRKNAAVSYQYS |
| 1M5Y Chain:A ((25-427)) | -------------------VDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAK-QNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQV---TE-LNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVD----RAYRMLMNRKFSEEAASWMQEQRASAYVKILS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84579 for 2386 contacts (-35.4/contact) +
2D Compatibility (PS) -37877 + (NN) -9683 + (LL) 3488
1D Compatibility (HY) -8800 + (ID) 3250
Total energy: -140701.0 ( -58.97 by residue)
QMean score : 0.420
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