Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKSDILCKRVIGIVGSGQLGKMTAIAATKLGQETHIFANAKDDPACSVANNLTIADFSDKKALESFAQSVSLVTIESENIPCDAIDIMSQYVDFYPGKRALHISQNRLREKDFIRNLGIRTADYKSIQDHNDLLEVTRAFGYPTRLKTTEMGYDGKGQYMIGNDSQVERFASF--DWNAQYILEASVDLLKEVSIVVTRDKNGKVAFFPVAENHHVDGILDTSIVPAKVDSKLVQEIQQTAEKIADALDVVGILAIEFFITKNSELLVNELAPRPHNSCHWSLDACNVSQFEQLIRVICKLPMQEVVLRFPCMTKNIIGNDVYNTYKYLSDKRANLTIYGKKEVRGRRKMGHVNIDLS
4M9U Chain:A ((3-344))-----------IGIIGAGQLARMLSLAGTPLGLEFHCLGK-NGDCAEEVVKTVTDIELTKVNDVVAWAKQFDVITFENENISHELIKAINHEVSVYPSAKAIAISQDRLLEKSFMQDHGIATAKFVNIDSLAKLQSAVDDHGLPAILKTRRFGYDGKGQFVIRSQEDITKAWDVLKDAPDGLIYEAFVDFDYEVSQICTADLKGNIAFYPLARNTHKQGIIVESEAPFE-NVVLAEKAQQIAKILVKEFAYVGTLAIEFFV-KGDELIVNEIAPRVHNSGHWSIDGAVTSQFENHVRAIAGLILGDTTSRKTVMLNCIGGMPATKDLAALD--RVKIHSY-NKEPRKGRKVGHLNLNLN


General information:
TITO was launched using:
RESULT:

Template: 4M9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171131 for 2897 contacts (-59.1/contact) +
2D Compatibility (PS) -37507 + (NN) -10188 + (LL) 1136
1D Compatibility (HY) -21200 + (ID) 6450
Total energy: -245340.0 ( -84.69 by residue)
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_4M9U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M9U-query.scw
PDB file : Tito_Scwrl_4M9U.pdb: