Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYTQLFISVIALVISLFAGYKVVKHQPQSVLNIKVAIIDSDKVINESLALHNIQQQIKEQNSKLQQEFENELDKLKPSKEELEL-----LSEE---AKKERAEQFNKLALNARDNYTKKMSYLEESYRDAVDSVFNKIKEVAKKTAEKNNIDLVLFISKKNQVLYSMNEIDLSDVVLKNINKEIPEFTLKGVN |
4KYA Chain:A ((56-124)) | -----------------------------------------------------------------RKTWESMPRKFRPLVDRLNIVVSSSLKEEDIAAEKPQAEGQQRVRVCA--SLPAALSLLEEEYKDSVDQIFVVGGAGLYEAALSLGVASHLYITRVAREFPCDVFFPAFPGDDILSNKATYRPIFISKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5989 for 289 contacts (20.7/contact) +
2D Compatibility (PS) -6130 + (NN) -429 + (LL) 6352
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -468.0 ( -1.62 by residue)
QMean score : 0.325
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