Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRRGRIRPENSARELRLRQNRRNTGRMMMKEVTEGLRQFELKSEIERREREPETFEDGTRKLLMGLT
2GPV Chain:G ((5-15))
--------------------------------------------------------LEAIIRKALMG--
General information:
TITO was launched using:
RESULT:
Template:
2GPV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -663 for 36 contacts (-18.4/contact) +
2D Compatibility (PS) -1102 + (NN) 432 + (LL) 4588
1D Compatibility (HY) -800 + (ID) 300
Total energy: 2155.0 ( 59.86 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_2GPV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GPV-query.scw
PDB file :
Tito_Scwrl_2GPV.pdb
: