Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSPAIFSIGPVSIHWYSLAYVLGIVFAYWHLHKLDEQKIFTKNFYDSLLTATIIGIILGGRLGFVLIYDPISYINNPIEILKTWKGGMSFHGGAIGVLCAVIISCRRYNIPIFYTLDLISCGVPIGLFLGRIGNFVNGELFGRVTTMPWGMVFPESGDNLLRHPSQLYEAFFEGLLFFAIANSLFFLTRIRLYHGTLTGIAVIWYGTVRFVVEFFREPDYQVGYLWLDLTMGQLLSIFMTLLGIIVYLSALNSKFNTKSVA |
| 1JB0 Chain:M ((4-28)) | ------------------------------------------TDTQVYVALVIALLPAVLAFRLSTELYK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5307 for 93 contacts (-57.1/contact) +
2D Compatibility (PS) -2471 + (NN) 1128 + (LL) 17716
1D Compatibility (HY) -800 + (ID) 250
Total energy: 10016.0 ( 107.70 by residue)
QMean score : -0.106
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