Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISGYKNHDLETFDDIFDSVFKIVYFQDKQLH-EILDSGEISKVLEILEIPHPSGKSFFLKEYLQKQVCRKKRAITQNSFRHFHTTIFSTTYKHFS
2IGP Chain:A ((47-93))
----------KDFLKIFTFLYGFLCP-SYELPDTKF-EEEVPRIFKDLGYPFALSKSSMYTVGAPHTWPHIVAALVWLIDCIKIH-----------
General information:
TITO was launched using:
RESULT:
Template:
2IGP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12132 for 242 contacts (-50.1/contact) +
2D Compatibility (PS) -4393 + (NN) 1807 + (LL) 1740
1D Compatibility (HY) -4800 + (ID) 450
Total energy: -18228.0 ( -75.32 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_2IGP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IGP-query.scw
PDB file :
Tito_Scwrl_2IGP.pdb
: