Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSSNDETKKKHEIDDLPKFFKEKSKEIGKAFSNKVVEISIIRSISVTSDEQEFSFKLRLLTIVDKDTHSIWILR
2LMF Chain:A ((1-23))
---------------LLGDFFRKSKEKIGKEFKRIVQR-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LMF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2288 for 92 contacts (24.9/contact) +
2D Compatibility (PS) -2258 + (NN) 250 + (LL) 4160
1D Compatibility (HY) -2000 + (ID) 400
Total energy: 2040.0 ( 22.17 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_2LMF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LMF-query.scw
PDB file :
Tito_Scwrl_2LMF.pdb
: