Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIILAAGHGKRMNSGLPKVLHKIGNFSMLQHIIYNARQLNPENISVVANL--PLIERLKCLEDIQLITQESTLGTGDAVKTAVRNMKELSDSNIIVVQYGDTPLIKNSTITQMVSCLEGKALVCLGFKTSNKE-YGRLIIENGSLREIVETQDDENSDEEFL--ANAGIMVAYAKNLRELVEKIECNGSTYEYYLTDIVSIAVKSNLNVGYV-TTDEEEATGINSRNDLAKAEFYFQENRRKFFTDSGVTLVAPE------TVFFSLDTQIGMDSIIYPYVFFGPGVRIGPG-----------AKIGPFTKCEDTTIGDGAI------------------VGNFVEAKASDIGTNTKIKHLSYIGNTEVGRESNIGAGTVVCNYDGKKKHRTNIGSNCFVGANSSLIAPLNVHDESVIAAGSIIVKDVPKKRLVITRRKQMVKKIK |
| 4KQL Chain:A ((9-443)) | --VILAAGKGTRMYSDLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANEQVNWVLQTEQLGTAHAVQQAAPFFK---DNENIVVLYGDAPLITKETLEKLIEAKPENGIALLTVNLDNPTGYGRIIRENGNVVAIVE-QKDANAEQLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKSTVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTITRDVGENELVITRVAQRHIQGW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KQL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240696 for 3024 contacts (-79.6/contact) +
2D Compatibility (PS) -42818 + (NN) -12273 + (LL) 644
1D Compatibility (HY) -30000 + (ID) 7850
Total energy: -332993.0 ( -110.12 by residue)
QMean score : 0.462
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