Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDEDLELLKFYYEVGIDCTLTEGNEEKKVEKEKNSKAIQSPTIQAEVQKKEQQSMFPSDWIIEARKLASKCNSMDELRSAVKSFEGCEIKK-TSTNTVFSDGNQSAKIMLVGEAPGANEDLKGIPFCGASGMLLDKMLSAINLDRTKVY------ISNTVFWRPP----GNRKPTDLELDMCRPFVEKHIALI-SPHILILVGGISCYSLLDNT--KTISTLRGRFHTYTNQYLSYSITTAVIFHPAYLLR-----QPAQKRLAWEDLKKIREYLNSTNNCTGV |
| 3IKB Chain:A ((3-194)) | ----------------------------------------------------------------------AMTSLEEITKAIMADSQNKVFTEKNIEPLFA-APKTARINIVGQAPGIKAQESRLYWNDKSGDRLREW---MGVDYDTFYHSGYFAVIPMDFYYPGKGKSGDLPPRK-G--FAQKWHQPILDLLPDIQLTILIGNYAQKYYLHQKSSVKLTDTVAHYKKY-------LPDYFPLVHPSPRNQIWMSRHPWFEAQVVPDLKKIIQQIIQSS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96332 for 1261 contacts (-76.4/contact) +
2D Compatibility (PS) -18630 + (NN) -11509 + (LL) 6276
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -130295.0 ( -103.33 by residue)
QMean score : 0.515
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