Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISSCNFCSRCNDTAGHYKIGNSYTINGIIYHPKHCNHYEEIGVASWYGIEDHGTLTANGEVFNRHLISAAHKTLPLPCFVLVTNLENGKKLVVRVNDRGPFVEGRIIDLSEKAAKILGLHKAGLAKVKVQYLRKISEQLIQRTPHYRKQHEKEMQKRHPKQDNAESKGYIA----FFENAQAAKSAASKLRNQGIKNVRLLFKDNQYCVKVSVVRVGLQNLAMVD |
1M6C Chain:A ((98-145)) | ------------------------------------------------------------------------------------------------------------------------------KIPVKYLEFISEAIIQV-----------LQSKHPGDFGADAQGAMSKALELFRNDMAAKYKELGFQG--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4256 for 197 contacts (21.6/contact) +
2D Compatibility (PS) -4820 + (NN) -3206 + (LL) 10276
1D Compatibility (HY) -4000 + (ID) 950
Total energy: 1556.0 ( 7.90 by residue)
QMean score : 0.315
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