Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKSIFTFSFFTAVSRISGLIRDILIAMVVGATSLADVFFSSFRFASLFRAFFAERAFATSFVPLYSAESRDSKRAFNFASSVISITFIIVLNFCLIMQTFFSYMVQIFTPGFDQSKLALAVTLSRIMMPYIIFASIASLIGGMLQVKQHFASTAIAPIILNLCLIASLLVPYIKTPAHNLSIAVLIGGMLQLLLMLFGAYKLKAFFFFSMKLSNEVKLFFKRVIPAIINSCVIQISLWIDTIMASFIPNAVSYIYYADRLNQLPQGVVGTAIGTVLLPLISKQANDTENTVKIQNRALNIGLMLIMPTTAAFIIIPNTILLTLFSYGKFDHYAVQQTAPTLIALSLSLPAFIINKVLLPTFFAKSNLKIPTIFSLACLGINVVLNLLLMNKYQHTGIAIATSISTWINSILLINYLTINKMYKANQVLLLNIAKILVATAV-----MSVALYVSSSLSAGLFFDRIFARVIYLAALVVLSAVIYFGTLYLMFMGDFKCTKL---- |
4KPP Chain:A ((2-396)) | ---------------------------------DFTKEKFQLLAISSLTLPWLISLAF----------NYHHPALTQTLLSGLAVVSASFLISWAAETAEMDV------PRSFSLAIVALL----AVLPEYAVDGYFAWKAGSVGGEYVHYATANMTGANRLLIGIGWSLVAFIAFRTLKSKEVELDDGIRLEIFFLFLA----TLYAFTLPLKGHIS----------------------PFDALVFVSLYAIYIYLSTKAEREEVEVGG-------VPAYLCSLKTETRRLSVVVLFLFAGFTILMS-------------VEAFSEGLLETARIAGIDEFLAVQWIAPLASESPELIVAIYFVRRF------------RVSASMNALISSKVNQWTLLIGTIAIIYSISAFKLQSLPLDARQSEEVLLTAAQSLFAVAILLDLKISWKEASALFLLFIVQLLFPGVEVRYIISAIYIILSLPILFAKRKEIVESFRTVKRLISLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -372278 for 3357 contacts (-110.9/contact) +
2D Compatibility (PS) -40802 + (NN) -15917 + (LL) 11616
1D Compatibility (HY) -14800 + (ID) 3150
Total energy: -435331.0 ( -129.68 by residue)
QMean score : 0.324
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