Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLGIEKRGITNALWKLQEADQREVLTLTQRFELPEILARTLAIRGVNIENAGNFLYPLIRSLLPDPFHLLDMDKAVFRIIQAINNDEN--IAIFGDYDVDGATSS-ALISRYLRAIGIHSIIYIPDRVDEGYGLNSNALLQLKKKGIDLCISV-------DCGTLAYQPIEDAKGFGLDVIVIDHHLGTEKLPSAIAVVNPNRLDESSPYNSLAAVGVSFLLTVALNKSLREQDFFAGKKEPDLFDLLDLVALGTVCDVMQITGLNRAFVSQGLKVMSARKNVGLRVLFDALGILERPNVSRLSFNIGPCINAGGRIGEALLGARLLSTDDKKEADSIALKLIDLNNARKMMENEALLEAIIQVEKSTQSGANFIMVSGNWHQGVIGIIASRLKEKFHLPTIVISLNNRIGKASCRSIPGVDIGAAVLSAKCMNLIIEGGGHSMAAGFLINEDKMSDLHDFLTERFAYSTNDKALKVDGIVTAKAINLSLWNQLQRLEPFGVGNPEPRFIIQGAKIRKPEIVGVDHIKCFIVDDDVMVRAIAFRSANTHLGSAIMEGNIEAILGKISMNYWNGNEFVQFLIEDVLTIS |
3E70 Chain:C ((119-218)) | -------------------------------------------------------------------------------LIEEIRKAEKPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDT------FRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGNAIVEQARQFNEAVKIDGIILTKLDADARGGAALSISYVIDAPILFVGVGQGYDDLRPFEKEWFLERIFG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3E70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -48507 for 593 contacts (-81.8/contact) +
2D Compatibility (PS) -9959 + (NN) -4146 + (LL) 26688
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -44024.0 ( -74.24 by residue)
QMean score : 0.390
|
|
|