Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLLTGELTSSVRQYLPHSLVLKDHGINKLAEKMKNELNEELEHANKLAERILLLKGVLNFQDTNEISKYDRKFIKDTIRKILEDNLKLEREGIKDYKEAISVAEKERDFVSAILLEEPLKNEEEHFPLD
4TOG Chain:A ((11-131))
LNKILGNELIA-INQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGKL------LIGENTQEMLQSDLNLELCATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYL
General information:
TITO was launched using:
RESULT:
Template:
4TOG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9612 for 862 contacts (-11.2/contact) +
2D Compatibility (PS) -13436 + (NN) -9993 + (LL) 188
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -45653.0 ( -52.96 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_4TOG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TOG-query.scw
PDB file :
Tito_Scwrl_4TOG.pdb
: