Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDLNKFTEKAKSLIQSAQMKALGTGHQVFMPEHLLKVMLEDESGLVQDLIGACGGNAQSISDAVNNAIKKFPIVKGPGSNSLQLSREVAKVFEDSIGMARRNKDSFVTVERLLQGLTAQKNDTVGKILAENGITPQKLNSVITEMRKGSSADSPNSEENLNAAKKYTKDVTELAMQGKLDPVIGRDEEIRRTMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLGLHDAKVLALDLGALIAGTKFRGEFEERLKAVINELAKAEGKIILFIDELHTLVGAGATSGAMDASNLLKPALARGEIRCIGATTLDEYREHIEKDPALARRFQPVFISQPTETDTVSILRGLKERYEVHHGIRITDGAIIAAAMLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPEIIDELERKIVQLKIESEVLKKERDENSKQRLKKINEEIENLNSKFTDLNSKWQMEKNKIARIQETAEKLDNARKELELAQRSGKLEKAGELMYGVIPHLENELMNQEKVTDSFLKKEVTEDDIANIVSKWTGIPVDNMMHSEKEKLLSMENEIGKRVIGQKDAIEAISNAVRRSRSGVQDTNRPFGSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILILTSNLGAEIMLKGVADFV-KSEVMQIVKSAFRPEFLNRLDEIIIFHSLTKDDIYKIIDVQFLYLQKIIVKRKLSISLSQEAKELIAQAGYDPEYGVRPLKRVIQECIQNNLAKLVLSGEVAEGDKLIVYAFNNEILVKKV
1KSF Chain:X ((418-733))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR----------NSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG


General information:
TITO was launched using:
RESULT:

Template: 1KSF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -173637 for 2219 contacts (-78.3/contact) +
2D Compatibility (PS) -32291 + (NN) -12296 + (LL) 38948
1D Compatibility (HY) -27200 + (ID) 6950
Total energy: -213426.0 ( -96.18 by residue)
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_1KSF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KSF-query.scw
PDB file : Tito_Scwrl_1KSF.pdb: