Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNGTVNKVILVGNLGRNPEIRTMQNGKEMANFSIATSEGWTDKFSGVRSEKTEWHN-------IVIFSEGLVKVVKDFVRKGSKVYIEGSLKTRKWTDQNGSERYTTEVVLQNFNGTLTLLDSRNNAASSDYKSNEYKQDETGQKDQYENFDSEVKEELIDDEIPF
1X3E Chain:A ((7-120))
--------ITVVGNLTADPELRFTPSGAAVANFTVASTPRM------------EWKDGEALFLRCNIWREAAENVAESLTR-GSRVIVTGRLKQRSFETRE--KRTVVEVEVDEIGPSLRYATAKVNKA--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45835 for 587 contacts (-78.1/contact) +
2D Compatibility (PS) -10266 + (NN) -577 + (LL) 2148
1D Compatibility (HY) -6000 + (ID) 1550
Total energy: -62080.0 ( -105.76 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_1X3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X3E-query.scw
PDB file :
Tito_Scwrl_1X3E.pdb
: