Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLPDKIIYEGKAKFIIETKDPLTVIQYFKDEVTAFNKEKYKIIEGKGTINNRISTFIMETLEKAGINTHFIKTLSEREQLVKKLKIIPLEIVVRNIAAGSFCKRFNIKEGEKLAFPIIEFFYKNDGLADPMVNENHVLYFGWLSYEEMEEIKTITIKINTVLIDLFLNAGIDLVDLKLEFGRPINDNTKITLADEISPDNCRLWDKNTHKKLDKDVFRLNLGNLKEAYLEVAKRLSVKLC
4O7S Chain:A ((15-232))
--------------MIPIDDDKLIME-FKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEHGIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLPLPEGYELPEPIVELYYKNDELHDPMINYYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGK--DKNGDIVLADEISPDTCRFWDAKTKRSLDKDVFRFDKGDLIEAYKEIYERITGEKP
General information:
TITO was launched using:
RESULT:
Template:
4O7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88126 for 1659 contacts (-53.1/contact) +
2D Compatibility (PS) -23393 + (NN) -2657 + (LL) 1380
1D Compatibility (HY) -23200 + (ID) 5000
Total energy: -140996.0 ( -84.99 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_4O7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O7S-query.scw
PDB file :
Tito_Scwrl_4O7S.pdb
: