Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFDVTILTIFPEMFPGFLNYSLAGKALEKKIWNLQVINIRFFAKDRHLTVDHIPYGGGAGMIMRPDVVGDAVDSVLSTHKDTK-FIYMTPSGTKFDQSIARELVGFPHITILCGRFEGIDQRVIDEYTPYELSIGDYILSGGEPAAMVILDVCVRLLPGVVNNSGSITEESFSYSGGVLEYPQYTRPKQWRKHRVPKILLSGNHKKISDWRQKQSQVITKRRRPELLDGEINDKFT
4YVK Chain:A ((23-246))---IGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGV---------DSF--ADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQ


General information:
TITO was launched using:
RESULT:

Template: 4YVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187180 for 1516 contacts (-123.5/contact) +
2D Compatibility (PS) -22798 + (NN) -7845 + (LL) 492
1D Compatibility (HY) -18400 + (ID) 4450
Total energy: -240181.0 ( -158.43 by residue)
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_4YVK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YVK-query.scw
PDB file : Tito_Scwrl_4YVK.pdb: