Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIKIAPSILSANFAKLGEEVKRINNLGVDYIHIDVMDGNFVPNITIGPGVISTIRKY--TNLFFDVHLMIKSPGDHVESFINAGADIITIHAEAEVHLERLIRKIKSYKNVNDAKKKVQVGVSIVPSTSPGIFEYIIHELDIVLIMTVNPGFGGQEFIYSQLGKISVVKKMIRERGLKTQISVDGGVSLSNAADIIKAGADILVAGSAIFRAKNMKKAVNDFKNLSL
3QC3 Chain:A ((5-218))
-GCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIR--------ENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV----HWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS
General information:
TITO was launched using:
RESULT:
Template:
3QC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178322 for 1794 contacts (-99.4/contact) +
2D Compatibility (PS) -23376 + (NN) -11133 + (LL) 856
1D Compatibility (HY) -19200 + (ID) 4250
Total energy: -235425.0 ( -131.23 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3QC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QC3-query.scw
PDB file :
Tito_Scwrl_3QC3.pdb
: