Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRTQYNNLVSSYARALFLVSENKLSVVRKEVEFLLAFFKSQHDVFIYLSHPMISFARKKEVIFSVNEHLSESLVKFIAVIFANKRSNLLISVLEKFLTLVR-ESENELEITIKSAETLSESNIKIITESLSFLGKIVRVDNAVDPSILGGFIVKYGFNLIDASLKSYLDRLVDLSKVEILKTRNFI |
3B2L Chain:A ((80-122)) | ----------------------------------------------------------------------------------------------EKVKTVVQLEGDNKLVTTFKNIKSVTELNGDIITNTMT-LGDIVFKRISKRI----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B2L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3895 for 198 contacts (19.7/contact) +
2D Compatibility (PS) -4458 + (NN) 102 + (LL) 11904
1D Compatibility (HY) -3600 + (ID) 900
Total energy: 6943.0 ( 35.07 by residue)
QMean score : -0.002
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