Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKNFQNNNDWSELLVSVRRVTTVTKGGRRFSFSILVVVGDEKGRVGCGMGKHAEVAEARIKAVNAAKKSMIRVYLREGRTLHHDIKAKFCSGEIVLRAARAGTGIIAGGAIRSVFEVLGIKDVVAKSTRSNNPHNVICAVFKAFDNMLSPRQVASKRGKKISEVVGNR
1HNZ Chain:E ((5-142))
----------DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNG-TIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKG---------
General information:
TITO was launched using:
RESULT:
Template:
1HNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110630 for 1098 contacts (-100.8/contact) +
2D Compatibility (PS) -14730 + (NN) -5073 + (LL) 1160
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -142973.0 ( -130.21 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_1HNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HNZ-query.scw
PDB file :
Tito_Scwrl_1HNZ.pdb
: