Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVDIADIRSKSSQELYEILVNLRKEFVNL-IFQKKLGQCNNISRFSLIRKSIARILTVLNERRIEGKSA
1K8A Chain:W ((5-62))
---VQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD-----
General information:
TITO was launched using:
RESULT:
Template:
1K8A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18794 for 303 contacts (-62.0/contact) +
2D Compatibility (PS) -6092 + (NN) -3293 + (LL) 504
1D Compatibility (HY) 0 + (ID) 950
Total energy: -28625.0 ( -94.47 by residue)
QMean score : 0.716
(partial model without unconserved sides chains):
PDB file :
Tito_1K8A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K8A-query.scw
PDB file :
Tito_Scwrl_1K8A.pdb
: