Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNRKDLLSVLDFTVNDVGNIIELAGQYLENKAANGRILENKTVINLFFEDSTRTLTSFEMAAKSLGANVVTLP--VKSSSINKGEDLTDMIKTLNAMNPDYIVVRQKSSGIVNMLAKHVSCL-LINAGDGSSEHPTQALADYFVISSHKKQIKNLKIVICGDILHSRVARSNIRLLKMF-GAKICLVAP-----PTLICKHFPE---VDSIYYSLIEGIKDADVIMLLRLQKERMNSGCFIPSNREYFYLYGLDSQKLLCAKSNAIVMHPGPINRGIEISSDI--TDHII-LQQVEFGLAIRKAVLHYYRPC |
| 1EKX Chain:A ((7-301)) | ---QKHIISINDLSRDDLNLVLATAAKLKANP--QPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTY-VDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFV----LRASDLHNAKANMKVLHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201233 for 2271 contacts (-88.6/contact) +
2D Compatibility (PS) -30622 + (NN) -13038 + (LL) 620
1D Compatibility (HY) -14000 + (ID) 4650
Total energy: -262923.0 ( -115.77 by residue)
QMean score : 0.547
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