Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------MIHVAIYMLLLCMSAMLYRIAKLSDIYNKALAFNHFSTQVILLITAVS----IILDSFFLVDIALLYASVSFISTIALMRLMLL----------------------------------------------------------------- |
3HKM Chain:A ((5-231)) | RADGRNPNQLRPFSCTRNPLDRAHGSARWAQGDTIVLAAVYGPKPGTRKGENPEKASIEVVWKPMTGQIGKQEKEYEMTLKRTLQSICL--------------------LTVHPNTTTSVILQVVGNDGSLLPCAINACCAALVFAGIPLKHLAVAIGCGVLEDGEVILDTNKAEEQQLKSFAHLVFPNLITSITHGVMSEEDYFSCIERGLAASSRISDFMRTTLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64978 for 309 contacts (-210.3/contact) +
2D Compatibility (PS) -6404 + (NN) -1601 + (LL) 2040
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -73743.0 ( -238.65 by residue)
QMean score : 0.189
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