Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKKVKLGILISGRGSNMQALMKACQNYGFPAEMACVISNNNKAAGLKVAEQAGMPTFVVENK----PLDVDK-IHEILVQHEVNLVCLAGFMRILKADFLNKWHGKVINVHPSLLPSFKGLNAQEQALKAGVKVTGCTVHYVTSEVDAGAIIAQAAVPVLPNDDIHSLSKRILSEEHKCYVEAVRLIAMLSRKLERP
4EW3 Chain:A ((2-185))
-----RVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGEN
General information:
TITO was launched using:
RESULT:
Template:
4EW3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145515 for 1436 contacts (-101.3/contact) +
2D Compatibility (PS) -20296 + (NN) -15624 + (LL) 736
1D Compatibility (HY) -19200 + (ID) 4600
Total energy: -204499.0 ( -142.41 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_4EW3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EW3-query.scw
PDB file :
Tito_Scwrl_4EW3.pdb
: