Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNTIIRKYDIRGVVGKDLQINDGYEIGRKFG-QTVAN----VCVGYDSRIDSPSIEKELIRGLTLSGANVIRIGLCSSPMLYAATQITQADLGIIITASHNPSDYNGFKFFSSEKVYLDQETKEIISSSIKN--STKIGSLINVNIYSQYIRVLKSAVKNNSTQKLKIAWDCGNSPASGIL-RYIETILPGHTHIIINNSIDGVFPLHNPDPIEEKNLVQLIDIVKQDKCDLGIALDGDSDRVRLIDNKGSIVSNDHLFMIFVREVLEECPRSKVIANVKMSMKVHDFVSKLGGQVVTCATGHSLVKKKMVEEGAKFAGELSGHFFFSE--LGFDDGLYSAIKAIDILLKQSQGLSQMIEDLPKLYITHEVKIVVKDEKKFQIIELIKKTLEQQNIAFSDLDGIKVTGNDNKGWWLLRVSNTQNCITARCEGDTLEDFELTKKVLFRYIDKAKSLDCNLS |
| 1K35 Chain:A ((9-460)) | LPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVAGETLANEQIQALRERIEKNDLASGVGSVEQVDILPRYFKQIRDDIA--MAKPMKVVVDCGNGVAGVIAPQLIEAL--GCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEGNITTLDGVRV--DYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTV-FR--NQLKAVDSSLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222777 for 3991 contacts (-55.8/contact) +
2D Compatibility (PS) -47580 + (NN) -19872 + (LL) 228
1D Compatibility (HY) -35200 + (ID) 8550
Total energy: -333751.0 ( -83.63 by residue)
QMean score : 0.514
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