Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEALKRVGTDFVLKTKDLFTPSESQVYVKDLRKVMIYKDGRKCRYPKNYDQVVESGKVIENKDMHGNSVLDKDRNPTYRLLYGNKNKDGWPIFELTKIMEIGDKSYFTIKFLVDKGKVSKGKCDNNDYHSFYKPFGFLKIDLEKYLPVFEAQKTKKSTCSFEFTNSSVPTKKTKNKKSNEVKEIVDEKERNGELLYTSDYKKLSTSFFEIRDQSNNLELGKSIISVPIVFAAGLAKICAKLLTYIPMELGEYLIGKQSLIAKFFGYFFLFTPAVAVKNSVNMLATLLKLPICAFVANKEEYGDAYWTMWKYQLKECWQEAKNDYSVIKDGKRSELKKKDYPKREVAGTWKELDAKRSIIEEELEGRLSKGDENMTDSGKQEKDLEQDTTQPRTLIQRKIDYVSKLNEERDQDKCVSQIHN |
4GFN Chain:A ((117-152)) | ----------------------------------VRVYKDGKVYYQEYRRGAVVDDLKVIEETDRHGTTVHFIPDPEIFTETTVYDFDKLATRVRELAFLNRGLHISIEDRREGQEDKKEYHYEGLEH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5793 for 175 contacts (33.1/contact) +
2D Compatibility (PS) -3633 + (NN) 920 + (LL) 22284
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 22614.0 ( 129.22 by residue)
QMean score : 0.273
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