Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSQSPKRMYGTGNNFVIIDSRSINNLNWN--YREIANQN---GCDQIIVITNSSAADCFMH--IYNADGGEVEMCGNAARCVGYLIMSEKSTEYATIELVNKRILECFKVGGRSI---------KVNMGKPLFKWHEIPLSA-KCDPLHLPIELEMLKDPVAVNIGNPHMVFFVDNISEIPLQSLGPKLEKHTLFPKKVNVNIAQVEKSGEISLRVWERGTGITASCGSAACAALIASVLRGYLITRQTSVNLPGGKLLIEW--PDN-IFMTGDIGFL |
| 4IJZ Chain:B ((5-262)) | -------KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKG--------LTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG-LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -186793 for 1927 contacts (-96.9/contact) +
2D Compatibility (PS) -25924 + (NN) -5309 + (LL) 984
1D Compatibility (HY) -14800 + (ID) 4650
Total energy: -236492.0 ( -122.73 by residue)
QMean score : 0.402
|
|
|