Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNTDQQQGLDSKEKSSEDLKPEKKREMKEAAAELKEGIKKSGAGNQSVGTEVSNQATTQDIDNSKTMEH
2APN Chain:A ((14-26))
-----------------------------AAANKVKSLISEEENTDLKLRVYITGGGCSGFQYGFTFDEK
General information:
TITO was launched using:
RESULT:
Template:
2APN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3148 for 46 contacts (68.4/contact) +
2D Compatibility (PS) -1545 + (NN) -1609 + (LL) 1476
1D Compatibility (HY) -800 + (ID) 200
Total energy: 470.0 ( 10.22 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_2APN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2APN-query.scw
PDB file :
Tito_Scwrl_2APN.pdb
: