Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYILASLSLPFFITENYLLITALVPLLSAVVILFTGKWPTVSNGITVASSVLLFVYTCLCTLYWAYGDHSQFILINFGNNLHVSLKLESTGVVFSLLISFLWILTSIYTIYYMQNNYPDSNYSDFLCFLLVSISCTMFIAFSGDLLTTFVFYELLTISTYPLVTYN-ATNESTIAGRYYFGVLFFSSLVLFFPVLGLLYNEFHTLDFVSSGIFEFDT--SLVTFTAVCFTMLIYGL-GKAALMPMHFWLPRAMVAPTPVSALLHAVAVVKSGAFIIVKVILYTFGIDNLQRFAQQNWFAGGWLPYAAGFTIIAASLIALKQKELKRLLAYSTVSQLSYIILFASIFSDLSARVAIFQLVCHAFAKITLFFIAGSIITKT-GEKYIDRIHGIGRSMPVTMVAFAIGALSMIGVPP-ASTFWGKFLIFQAVFNSGNIALSVFVTLVLTVGTVLNAMYFLPIIYNAFFSKSSKNFFIKKIPVFLILPPVITAICTFIIFLVTPFILPLC |
| 3RKO Chain:L ((75-470)) | ---------------------------------------------------------------------------------IGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGE-EG--YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVG-DVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT----------PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQA---WDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHI----NLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIH-AHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -515281 for 3685 contacts (-139.8/contact) +
2D Compatibility (PS) -38625 + (NN) -631 + (LL) 8000
1D Compatibility (HY) -28800 + (ID) 5100
Total energy: -580437.0 ( -157.51 by residue)
QMean score : 0.342
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