Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKDLILLGIASVIGALTGLWLSFTALSHLIIGGVIAAIPVMLLSAYYICDSIRKGKFSKKDLFESYLCMLHKCHDWSWSCCNRNCFFPGAMIGIGYATLAGGAIAPIIAIFPMYSIIVPIAEKVNEYIIFPIIEYFSLKGKEHEQV |
| 1COL Chain:A ((178-201)) | ----------------------------------------------------------------------------------------------------------LLAA-VVGALIDDKFADALNNEIIR---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1COL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13568 for 111 contacts (-122.2/contact) +
2D Compatibility (PS) -2301 + (NN) 1442 + (LL) 9216
1D Compatibility (HY) 0 + (ID) 300
Total energy: -5511.0 ( -49.65 by residue)
QMean score : -0.006
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