Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIHSDSPRQCLEEIIKSASAKFNESIDIAVNLGIDSRKSEEQVRGTVVLPKGIGKDIKVAVFTQGKHLLEAEKAGANIVGGEDLVQEIKKGKKLDVDWCITTPDFIAKI-TPIAKILGAKGLMPNPKFGTMTSNVAEAIKTIKSGQIKFRTDKNGIIHGKLGNIKFSVDDLLKNLKAFLKVIKSNKPISVKGVYFKSVFLNSTMGKAYKMSKVEDII
1ZHO Chain:A ((33-225))
------------------ATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWM-DFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS---
General information:
TITO was launched using:
RESULT:
Template:
1ZHO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95126 for 1464 contacts (-65.0/contact) +
2D Compatibility (PS) -21131 + (NN) -13890 + (LL) 1744
1D Compatibility (HY) -14800 + (ID) 4050
Total energy: -147253.0 ( -100.58 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1ZHO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZHO-query.scw
PDB file :
Tito_Scwrl_1ZHO.pdb
: