Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKEKLFYTIGEVAEELHLEQHVLRFWESQFRQIKPIKRKGRRLYDHKCIEVIKKIKYMLYDKGYTIKGVQKEFDNNIKSSCNFGNLLPQLIDLRDYLINKINSEKSNEQL
4UA1 Chain:A ((3-67))
-------FRIGELADKCGVNKETIRYYERLGLIPEP--EKGYRM--QQTVDRLHFIKRM-QELGFTLNEIDKLLGVVDRDEAKCRDMYDFTILKIEDIQRKIEDLKRIERM
General information:
TITO was launched using:
RESULT:
Template:
4UA1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18849 for 355 contacts (-53.1/contact) +
2D Compatibility (PS) -6098 + (NN) -552 + (LL) 1128
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -28771.0 ( -81.05 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_4UA1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UA1-query.scw
PDB file :
Tito_Scwrl_4UA1.pdb
: