Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNVGRTVKVTQAVVDLKFEGELPRIFNALKSKLEYRGKE--LILEVSQHIGDNIVRCIAMDSTNGVSRNDEFVDTGAPISVPVGRSTLGRIFNVVGEVIDECGPLKGKYDLESIHRVPPSFTEQKIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKAHKGFSVFAGVGERTREGNDLYHEMITSNVINVNEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGSEISALLGRMPSAVGYQPTLATDMGAMQERIASTTSGSITSVQAIYVPADDLTDPAPAATFSHLDSTTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIVGEEHYKVTSEVKRILQTYKSLQDIIAILGMDELSDEDKITVDRARKIQKFFSQPFHVAEVFTGMPGKFVSLSDTVSSFKGIVEGEYDHLPEAAFYMVGNIDEAIKKAELIKDETKVGAKS |
2JDI Chain:D ((15-479)) | ---GRIVAVIGAVVDVQFDEGLPPILNAL----EVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPIKTK-QFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKD-ATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214745 for 4026 contacts (-53.3/contact) +
2D Compatibility (PS) -49123 + (NN) -8728 + (LL) 1152
1D Compatibility (HY) -57200 + (ID) 16550
Total energy: -345194.0 ( -85.74 by residue)
QMean score : 0.485
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