Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNHKNVKKMIKAIAKRTLINKMRKSKTRTAIRKLVDIIKSGNKENVTPAFRSAESNLHKCVSKGVIHKNTAARKISRLNAKVKALMTA
2UXC Chain:T ((21-94))
---------------KRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEA
General information:
TITO was launched using:
RESULT:
Template:
2UXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11798 for 505 contacts (-23.4/contact) +
2D Compatibility (PS) -7969 + (NN) -3368 + (LL) 1636
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -22999.0 ( -45.54 by residue)
QMean score : 0.665
(partial model without unconserved sides chains):
PDB file :
Tito_2UXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UXC-query.scw
PDB file :
Tito_Scwrl_2UXC.pdb
: