Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKILVRSNYKPLVGQIKINGSKNAILPIMAASLLSSSSVVLHNVPDLIDVHLMSELLEGLGAKVNFMHNKDHKANHTLETDCSNINNYAIQYETASKLRASFLMLGPMLSRFGKARTAFPGGCNIGKRPVDMHIKALEEMGAKIEIDGYNIIATVKGK-LQGRKITLEKISVGATENIIMAATLAEGVTTINNAATEPEILDLIEFLKKIGADIKINNTKVII-TGVKKLNGCIHKIISDRIEAGTY-ALAAIITNGKLVLEGINLSDIRCIANELEAIGAMVELYDGSIVISRKNGSIKSTNVATDPYPNFPSDMQPQLMSAMCIADGISVIEENIFENRFSHADELRKLGANISIKKNKAAINGIKSLSGANLYATDLRSTAALVLASLVASGETTINNSHHLWRGYEAMHEKLNSCGADISISP |
| 3ZH4 Chain:A ((1-416)) | MRKIVINGGL-PLQGEITISGAKNSVVALIPAIILADDVVTLDCVPDISDVASLVEIMELMGATVK-------RYDDVLEIDPRGVQNIPMP---INSLRASYYFYGSLLGRFGEATVGL----DLGPRPIDLHLKAFEAMGATASYEGDNMKLSAKDTGLHGASIYMDTVSVGATINTMIAAVKANGRTIIENAAREPEIIDVATLLNNMGAHIRGAGTNIIIIDGVERLHGTRHQVIPDRIEAGTYISLAAAVGKG-IRINNVLYEHLEGFIAKLEEMGVRMTVSEDSIFVEEQS-NLKAINIKTAPYPGFATDLQQPLTPLLLRANGRGTIVDTIYEKRVNHVFELAKMDADISTTNGHILYTGGRDLRGTSVKATDLRAGAALVIAGLMAEGKTEITNIEFILRGYSDIIEKLRNLGADIRLVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259169 for 3696 contacts (-70.1/contact) +
2D Compatibility (PS) -43321 + (NN) -12199 + (LL) 112
1D Compatibility (HY) -35600 + (ID) 7900
Total energy: -358077.0 ( -96.88 by residue)
QMean score : 0.481
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