Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
4KAT Chain:A ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSFDMGLKDEERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLKADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDILK-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4KAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157834 for 1529 contacts (-103.2/contact) +
2D Compatibility (PS) -21338 + (NN) -2660 + (LL) 5608
1D Compatibility (HY) -19200 + (ID) 4850
Total energy: -200274.0 ( -130.98 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_4KAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KAT-query.scw
PDB file :
Tito_Scwrl_4KAT.pdb
: