Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLPATPDNSTAVAIIPIAAILGIIPIATSVAPIAPNN-NAKPIVHPPEKVLEGCCFCEEIMLVYYKTVARCFVFCANYYYFHHLQTFFEMELYYL
1U0T Chain:A ((194-240))
---STPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPEATIAIEIEADGHDALVFCDGRREMLIPAGSRLEVTRCVTSVKWARLD
General information:
TITO was launched using:
RESULT:
Template:
1U0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2982 for 267 contacts (-11.2/contact) +
2D Compatibility (PS) -4994 + (NN) -3350 + (LL) 244
1D Compatibility (HY) 0 + (ID) 700
Total energy: -11782.0 ( -44.13 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_1U0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U0T-query.scw
PDB file :
Tito_Scwrl_1U0T.pdb
: