Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVIFTQDVKGKGKKGEVKEVPVGYANNFLLKKNYAVEATPGNLKQLELQKKRAKQERQQEIEDAKALKETLSNIE-VEVSAKTGEGGKLFGSVSTKQIAEALKAQHDIKIDKRKMDLPNGI-HSLGYTNVPVKLDKEVEGTIRVHTVEQ |
3J8G Chain:H ((1-149)) | MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAA-GVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31969 for 1014 contacts (31.5/contact) +
2D Compatibility (PS) -14883 + (NN) 734 + (LL) 44
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: 4264.0 ( 4.21 by residue)
QMean score : 0.241
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