Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPASILNKSVKGIKLEQITGRSKDFSSKAKGDSD---LTTS-----DGGKLLNANISQSVKVSDN-NLKDLKDYVNKRVFKGSEYQLSEIN--SGSVKYEQTYDNFPILN------NSKAMLNFNIED-NKAASYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHDGKD---K-TNTYYVEATNNNPKIINH |
| 2O3O Chain:A ((14-252)) | -------------------------------------KNDVEHDMKADHITY-EG-LN--KEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFK-QI---QKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEK--EKKTVQEYFTVNALESTILDT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22719 for 1524 contacts (-14.9/contact) +
2D Compatibility (PS) -22554 + (NN) -3047 + (LL) 3816
1D Compatibility (HY) -10400 + (ID) 2350
Total energy: -57254.0 ( -37.57 by residue)
QMean score : 0.449
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