Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLCEAVGSADQNHKTFKTFLFFTRKKKQKNLPSATSAKGGFALVLV
2LR1 Chain:B ((1-21))
--------CEALKKALRRHRFLWQRRQRA-----------------
General information:
TITO was launched using:
RESULT:
Template:
2LR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 582 for 70 contacts (8.3/contact) +
2D Compatibility (PS) -2084 + (NN) -1195 + (LL) 1652
1D Compatibility (HY) -400 + (ID) 100
Total energy: -1545.0 ( -22.07 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_2LR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LR1-query.scw
PDB file :
Tito_Scwrl_2LR1.pdb
: