Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTTQELKQYITRLFQLSNNETWECEALEEAAENILPERFINDSPLAHLTLETYTYYNNELHDLSIYPFLMYANNQLISVGYLNHFDMDFLYLTDTKNTIIDERHLLREGGTHHE
1ZSQ Chain:A ((450-506))
----------------------TFLCNSEQQRGKENLPKR----------TVSLWSYINSQLEDFTNPLYGSYSNHVLYPVASMRHLEL---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZSQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1054 for 220 contacts (-4.8/contact) +
2D Compatibility (PS) -5693 + (NN) 180 + (LL) 4132
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -7185.0 ( -32.66 by residue)
QMean score : -0.290
(partial model without unconserved sides chains):
PDB file :
Tito_1ZSQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZSQ-query.scw
PDB file :
Tito_Scwrl_1ZSQ.pdb
: