Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFNQSDKFEQLKKKILGISFNLPEGEEFTFHDLNSRANVQCSKAVQQNVGRWFAYFVKH--APRVPFIIIGKDTHGHLVYLKTGPNPHYNSNPSKGGVR
2FN4 Chain:A ((97-125))
-----------------------------------------------NEVGKLFTQILRVKDRDDFPVVLVGNKAD------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FN4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10408 for 91 contacts (-114.4/contact) +
2D Compatibility (PS) -3029 + (NN) -2469 + (LL) 3028
1D Compatibility (HY) -3600 + (ID) 250
Total energy: -16728.0 ( -183.82 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_2FN4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FN4-query.scw
PDB file :
Tito_Scwrl_2FN4.pdb
: