Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRVSYSVETKYKAVEMKAA--GFSTKEIMKELNIKNRTQVETWWRWYRNGESYRFSQHVGKQYTYGKGLEELSEVEQLKLENKRKDIELDILKKYKALERKWYQQ
1HLV Chain:A ((4-52))
-KRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPP-STLSTILKNKRAI-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HLV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5462 for 259 contacts (-21.1/contact) +
2D Compatibility (PS) -5236 + (NN) -2176 + (LL) 4796
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -10128.0 ( -39.10 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_1HLV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HLV-query.scw
PDB file :
Tito_Scwrl_1HLV.pdb
: